BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C08LP1|AL430678
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1867 0.0
>3x_Contig1493
Length = 12243
Score = 1867 bits (941), Expect = 0.0
Identities = 956/959 (99%), Gaps = 2/959 (0%)
Strand = Plus / Plus
Query: 1 atcttgtaaattagataaatagagaaaatcaatgttgtcactttcgaagcgaaaaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4966 atcttgtaaattagataaatagagaaaatcaatgttgtcactttcgaagcgaaaaagtga 5025
Query: 61 aagcagaaaaggatgcaaatagcaaaggatacagagagactatatggtttgataaccgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5026 aagcagaaaaggatgcaaatagcaaaggatacagagagactatatggtttgataaccgca 5085
Query: 121 ttaggagactcaattaaccaaagggtatttaaaacaaagttgacagtttaaatagggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5086 ttaggagactcaattaaccaaagggtatttaaaacaaagttgacagtttaaatagggaga 5145
Query: 181 gattaacctaataatagaaacattttagtcacgtgacttaaatataggaatgaagaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5146 gattaacctaataatagaaacattttagtcacgtgacttaaatataggaatgaagaaaga 5205
Query: 241 atctcccccactgbcccccctcaatcattaactttaatagagcattatataattgcatga 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5206 atctcccccactgccccccctcaatcattaactttaatagagcattatataattgcatga 5265
Query: 301 attagtggctttcaagacagtcacgagcgcgccgctacactgcctcaatctctttgaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5266 attagtggctttcaagacagtcacgagcgcgccgctacactgcctcaatctctttgaact 5325
Query: 361 tgttgtatcaatatactcttaatacctgcttctaatattaatgaagcatggacaactttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5326 tgttgtatcaatatactcttaatacctgcttctaatattaatgaagcatggacaactttc 5385
Query: 421 aaaaggtaaagtatcaatatgagcaataaactttaacagaacataaataatgcgacttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5386 aaaaggtaaagtatcaatatgagcaataaactttaacagaacataaataatgcgacttga 5445
Query: 481 actatatagaatcagatacgcatacggtaagctggctacacttgcctcggacgaagcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5446 actatatagaatcagatacgcatacggtaagctggctacacttgcctcggacgaagcctt 5505
Query: 541 ggaatttgtgcttaacaatgctagaaaagatgttccacaaaatgagagcacatgaccgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5506 ggaatttgtgcttaacaatgctagaaaagatgttccacaaaatgagagcacatgaccgaa 5565
Query: 601 tttcacttttgtccaaacttgtcgtttttgtggtcagcggctaatttgacttactgatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5566 tttcacttttgtccaaacttgtcgtttttgtggtcagcggctaatttgacttactgatgc 5625
Query: 661 tacaggcgcgcgaggaaaaagaaaatgacattacccggaaaaataatgcgggagagaaga 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5626 tacaggc-cgcgaggaaaaagaaaatgacattacccggaaaaataatgcgggagagaaga 5684
Query: 721 attgcggattttagtgcacggatccgtggttagttcacgtgacagatgtcggcacccatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5685 attgcggattttagtgcacggatccgtggttagttcacgtgacagatgtcggcacccatg 5744
Query: 781 gcaactcgccaactcgattggcaacgattggcttccggccggtcgaagg-cggaaaaaag 839
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5745 gcaactcgccaactcgattggcaacgattggcttccggccggtcgaaggccggaaaaaag 5804
Query: 840 aaccaactacgggtctgtttccaatccaatcttcaacattgggtgcatattgctttgagc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5805 aaccaactacgggtctgtttccaatccaatcttcaacattgggtgcatattgctttgagc 5864
Query: 900 gagaatatccgattgggttccgcaccagctaattttctccaacttaaactttcaatctc 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5865 gagaatatccgattgggttccgcaccagctaattttctccaacttaaactttcaatctc 5923
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7412
Number of Sequences: 1807
Number of extensions: 7412
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)